An ongoing dialogue on HIV/AIDS, infectious diseases,
May 6th, 2018
Looking Back on a Decade of Blogging About HIV and Infectious Diseases
Last week, Dr. Wendy Armstrong from Emory kindly invited me to spend some time with their smart, energetic ID fellows.
(See if you can pick me out of the group in the photo at right — hint, I’m the old guy on the left.)
Before the trip, Wendy asked them whether they’d rather hear me give a talk entitled “Evolution of Antiretroviral Therapy” — or alternatively, something about writing this blog, which has just celebrated its 10th Birthday (see colorful banner above).
The email I got back from her was unambiguous:
100% chose the blog.
Although their decision might be viewed as a dismissive of my command of HIV treatment (never!), the good news is that giving this talk gave me a chance to reflect on the 10 years of the blog’s existence.
Before going through the data unearthed by our crack team of research scientists, a little bit about its beginnings. Inspired in the late 2000s by the writing that exploded on the internet about everything, I pitched something similar to the folks at NEJM Journal Watch.
It would be about ID, HIV, and whatever else happened to be swimming around in my head on any given day I had time to write something. That was it.
Fortunately, they said yes — thank you! I am also grateful to the community of readers who show up here regularly, interact in the comments section or on Twitter, and teach me (and other readers) so much.
Let’s move on to the data, all of it 100% verified by the Centers for Disease Control and Prevention and the World Health Organization:
- Proposed blog titles. Infectious Enthusiasms. Infectious Observations. Infectious Insights. Sax, Bugs, and Drugs. Point of View Blog. As you can tell, none of them was a clear winner (and some were pretty terrible), so we went with the current one, bland though it may be!
- Total number of posts = 648. That’s one post every 5.63271604938 days. (Approximately.)
- The most common posting day is Sunday. It’s not particularly close, either. Guess how I spend at least part of my weekends?
- First post, March 20, 2008: How to Solve at Least One Part of the Healthcare Mess: ADAP for All. The basic premise here was that with the AIDS Drug Assistance Plan (ADAP) working so well for HIV treatment, why not expand it to other disease areas? Perhaps it was not the most incisive analysis of our troubled healthcare “system” – still, I thought it might raise a few chuckles and generate conversation. Indeed:
- First comment, March 26, 2008: Comments got off to a bruising start, courtesy of “David”, who wrote: “You propose a National plan that only takes care of the patients in your specialty. This is an amazingly irresponsible, greedy, self centered plan … Wake up — it’s not just about you.” Sorry, David — if you read what I wrote (I know, a challenge) … oh, never mind.
- Total comments: 3,392. Some of you are regulars, and I especially thank you.
- Total spam comments: 37,861. This proves without a shadow of a doubt that spam bots are fascinated with Infectious Diseases. Who can blame them?
- Total number of page views: 1,996,042. I’m pleased to announce that the person responsible for page view number 2 million will win a free subscription to this blog. And yes, I plan on continuing to use that joke whenever possible.
- Where are the readers from? All over! (See map.) An ID physician from Korea once approached me in the airport, and asked me about doctors named Morgan. I kid you not.
- Most viewed posts. HIV and Hepatitis C Are No Longer the Most Serious Infectious Threats to People Who Inject Drugsis #1. Other big-time favorites:
–Why ID/HIV Specialists Rank Last in MD Salaries
–The Most Common Question About the New HIV Testing Algorithm, Answered
–Clindamycin vs. TMP/SMX for Soft Tissue Infections: A Clinical Trial That Needs Some Marketing - Most commented posts: the ID caption cartoon contests, of course! Thank you Anne Sax for your drawings! But if you subtract those, the most commented is (again) HIV and Hepatitis C Are No Longer the Most Serious Infectious Threats to People Who Inject Drugs, followed by (in order):
–Mystifying Abbreviations on Daily Medical Rounds,
–Should Doctors Still Be Allowed to Wear White Coats? You Decide
–Are ID Doctors the Worst Dressed Specialists?
–Can We Solve the Morass of Outpatient Intravenous Antibiotic Therapy?,
–A Ridiculously Long Post: How EHRs Expose Unspoken Hierarchies Within Medicine — Or Maybe Are Just Bad. - Common blog topics? ID is a great specialty, with great conferences, and should not be undervalued. ID Learning units (a chance to teach). Rants about EMRs, fax machines, beepers, OPAT, Boston weather, and “HAART” (ugh). ID Link-o-Ramas. Curbside consults, in all their glory. Tributes to ID heroes. Really Rapid Reviews® — which are summaries of the major HIV conferences done (unsurprisingly) really rapidly!
- Most likely posts to generate controversy and negative comments. In ID, the leaders are Lyme Disease and chronic fatigue syndrome, both of which deserve much better research and treatments. Surprisingly, quinolone antibiotics are also a hot-button topic. Of course, anything about politics. Reminder, as a polite and civilized ID blog, we have a moderated forum — which means that nasty, threatening, or hateful comments that don’t adhere to our guidelines get nixed. Sorry.
- Total number of posts that mention baseball and/or dogs? Lots. Amazing how often these subjects (ID and baseball, ID and dogs) can overlap, provided you have the right mindset. Here’s your baseball list. Specifically, all-stars Tom Seaver, Derek Jeter, Nelson Cruz, Alex Rodriguez, Ryan Howard, Ryan Braun, Roberto Alomar, and Edgar Martinez (among others) all found their way onto this blog — no doubt much to their surprise. And here’s your dog list. Louie is a particular favorite — click here, if you dare — what’s not to love?
Of course there have been challenges. Finding good copyright-free images is always tricky. Who wants a frivolous lawsuit because we happened to use a cherished (and legally protected) picture?
This concern explains the 100% legal but strangely artificial stock images that show up here periodically — which I enjoy mocking whenever possible.
Probably the most common question I get asked by colleagues is “Why do you do that?” Usually I answer with a superficial, “Because it’s fun,” but on further thought, it’s more than that.
As you know, most academic writing is quite formal. The writing one does for research papers in particular must include the perspectives of multiple co-authors.
Then, once the journal gets it, it’s further edited to suit their style. By the time of publication, the original text reads like it’s been through a powerful prose homogenizer machine — everyone sounds the same.
Here I can say whatever I like (within reason), include jokes and funny images and videos, and actually sound like myself. It’s a great privilege, and a true joy.
So to Matt O’Rourke, Catherine Ryan, Kristin Kelley, Amy Herman, Kelly Young, and Bob Dall — all at NEJM Journal Watch — I thank you again.
And here’s my latest sports discovery, Flyball. Hey, what a perfect name!
April 29th, 2018
ID Learning Unit: Clinically Important Streptococcal Infections You Need to Know
As mentioned last week, I’m currently attending on the general medical service, a chance to brush up on non-ID clinical skills, and more importantly, to work with smart, energetic house staff and medical students.
Not surprisingly, there’s a wide range of clinical ID on this service, and this year we’ve had a rash of streptococcal infections.
(Get it — “rash” and “strep”? Ha ha ha, medical puns are so funny.)
These cases motivated the following summary of clinically important streptococcal infections. They’re worth reviewing because they are common and can be severe; additionally, streptococcal taxonomy has got to be one of the most complicated, confusing, and ever-changing areas in all of microbiology.
It seems to have always been this way with strep — I remember struggling with the right nomenclature back during ID fellowship, and it hasn’t become easier over time. Some of these bacteria have had many names over the years, all synonymous and used interchangeably in medical conversations and literature without rhyme or reason.
Sorry about that. Maybe we should send a letter of protest to the International Association of Streptococcal Taxonomic Standards, which doesn’t really exist — but if it did, they’d deserve our cranky petition.
Here then, is a “Strep Infections 101” course — the ones you should remember, and why, with perhaps a few fun taxonomic facts thrown in. Fun, at least, to ID geeks like me.
And since I’m neither a microbiologist nor a super-specialist in bacterial infections, apologies ahead of time for any errors.
- Invasive beta-hemolytic streptococci: Named “beta strep” by their characteristic clearing when they grow on blood agar (for some ancient reason called “beta hemolysis”), they are further classified by their Lancefield antigen status, referring to their carbohydrate composition of their cell walls. These include most importantly Strep pyogenes (group A strep, GAS) and Strep agalactiae (group B strep, GBS). The former is the well-known cause of pharyngitis and skin infections — everything from cellulitis to erysipelas to lymphangitis to necrotizing fasciitis (it’s the dreaded “flesh-eating bacteria”). Strep pyogenes can also cause scarlet fever (see rash “joke” above), and is unique among these bacteria in causing rheumatic fever. Strep agalactiae is best known as a pathogen of newborns (and for being difficult to spell) — but with our strategy of giving prophylaxis to pregnant mothers who are colonized with GBS, it’s actually more common now as a cause of invasive disease (bacteremia, sepsis, osteomyelitis) in adults, most of whom have comorbid medical conditions such as diabetes, alcoholism, or liver disease. Three other lettered beta-streps (groups C, F, and G) cause pharyngitis and clinically important invasive infections, but we hardly ever refer to them by their species names — weirdly, just their letter (for example, “beta-hemolytic streptococcus group G”). Therapeutically, a welcome characteristic of all these beta streps is that they remain susceptible to penicillin and most cephalosporins — hooray!
- Strep pneumoniae. Once upon a time this would have been listed #1! However, though still one of the leading causes of otitis media, sinusitis, pneumonia, and meningitis, the incidence has dramatically declined due to our two available pneumococcal vaccines. Particularly susceptible hosts include those with defects in humoral immunity or asplenia — myeloma, HIV, certain congenital immunodeficiencies, sickle cell disease, alcoholism. Penicillin susceptibility has gradually declined (though most are still penicillin susceptible), while respiratory fluoroquinolone activity fortunately (and surprisingly) has not, at least here in the USA.
- Endocarditis-causing “Strep viridans”: Normal inhabitants of the mouth, and known primarily as a common cause of endocarditis, the viridans streptococci are actually multiple different species of strep frequently lumped under the pseudotaxonomic name, Strep viridans. Many have alpha (green) hemolysis on blood agar, from which they derive their name (viridis is Latin for green); some have no hemolysis at all. Microbiology purists don’t generally like pseudotaxonomic names, and hence your lab will report something more specific than Strep viridans, e.g. Strep mutans, Strep salivarius, Strep mitis, etc.
- Also endocarditis-causing Strep bovis — I mean Strep gallolyticus: I nearly put Strep bovis in the above group since it has also become a pseudotaxonomic name; turns out these bacteria previously identified as Strep bovis are actually multiple different species — Strep gallolyticus, Strep infantarius, probably others. Since I don’t really understand all this, and only have so much time in the day, I was heartened to read the following in a recent review: “The history of the Streptococcus bovis group is complicated and confusing due to conflicting classical distinctions based on imperfectly differentiating phenotypic attributes and due to modern disagreements concerning the optimal molecular methods for identification to the species level.” That’s for sure! Endocarditis with Strep bovis (ok, Strep gallolyticus) is most famously associated with colon cancer — a fact that almost 100% of even apathetic medical students know. The penetrance of this bit of microbiology trivia might even surpass medical students’ knowledge of listeria. Which makes me wonder — why are some random facts so memorable? And will this sticky Strep bovis knowledge persist with the new name?
- Abscess-forming streptococci — Strep anginosus, Strep intermedius, and Strep constellatus: Formerly known simply as Strep milleri (those were the days), these streptococci also turn out to be multiple different species, and are now named after one of the three principal isolates, Strep anginosus — hence the term Strep anginosus group is preferred over Strep milleri. In addition to Strep anginosus, you might also find Strep intermedius or Strep constellatus — all three are common causes of dental, lung, liver, brain, and other abscesses. (These species also may have subspecies, but I’m not going to go there. You’re welcome.) As with the beta streps, they have retained penicillin and cephalosporin susceptibility — ceftriaxone is the drug we most commonly use for treatment.
There are, of course, numerous other streptococcal infections, but these are the most common ones on a general medical service.
Plus, it’s time to watch a big inflatable duck rolling down a highway in Des Moines.
A large inflatable duck escaped a charity event in Des Moines, Iowa, after breaking free of its tethers, and was spotted tumbling down a road as motorists calmly drive by. https://t.co/4HkDclPLLH pic.twitter.com/06y536SNGy
— ABC News (@ABC) April 29, 2018
April 22nd, 2018
Some ID Stuff We’re Talking About on Medical Rounds — with Bonus Andy Borowitz Podcast
As an infectious diseases specialist attending on the general medical service each year, I am the beneficiary of a wonderful knowledge exchange.
The smart house staff and my generalist co-attending teach me the latest about hyperkalemia, anticoagulation, anemia, alcohol withdrawal, acute renal injury, COPD, atrial fibrillation, pancreatitis, asthma, diabetes, and congestive heart failure — to name a few of the non-infectious issues that come up routinely during inpatient care.
For example, I am now quite comfortable saying HFpEF — which, if you haven’t done inpatient medicine in a while, is pronounced “HEF-PEF,” and most certainly did not get mentioned a single time during my residency training.
And what do they get in return? A bunch of infectious diseases snippets, factoids, random comments, and (I hope) clinical pearls, such as the following:
- A shorter course of antibiotics should in many conditions become standard of care. In addition to the linked review, two studies at the current ECCMID meeting in Madrid also showed that shorter is just as good as longer — or even better! There’s less drug exposure, less chance for toxicity, and a faster return to usual activities. The studies were: 1) Three versus eight days for community-acquired pneumonia, and 2) Seven versus fourteen days for gram-negative blood stream infections. We will obviously need to see the full details of these studies once published, but it looks like the antibiotic “course” has had its day.
- Guidelines for treatment of uncomplicated lower UTI in women recommend nitrofurantoin, trimethoprim-sulfamethoxazole, or fosfomycin. And hot off the presses — nitrofurantoin for 5 days is better than single dose fosfomycin. Note that quinolones are not included due to concern about “collateral damage,” specifically in this paper their effect on antibiotic susceptibility. See below for an additional concern about quinolones we discussed on rounds this week.
- The guidelines for diagnosis and treatment of C. diff have been updated. Among the highlights: vancomycin or fidaxomicin (not metronidazole) for first-line therapy; vancomycin taper or fidaxomicin for first recurrence (if vancomycin used as initial therapy); for more than one recurrence, vancomycin followed by rifaximin; and for patients with multiple recurrences, referral for fecal microbiota transplantation (FMT). There’s also an acknowledgement that nucleic acid testing alone (without the proper clinical correlation) has an unacceptably high false-positive rate.
- The Advisory Committee on Immunization Practices (ACIP) now includes the new hepatitis B vaccine. The vaccine (called HepB-CpG or “Heplisav-B”) is indicated for HBV-seronegative individuals over 18. Given as two doses separated by 1 month (rather than three doses over 6 months), HepB-CpG is both easier to give and more immunogenic, yielding protective antibody responses in 90.0%–100.0% of recipients vs. 70.5%–90.2% with the older vaccine. As with the other recently approved “adjuvanted” vaccine for zoster, postmarketing safety data will be important, as will data on its efficacy in prior non-responders.
- The price of linezolid has plummeted — but you’d still better shop around. I’ve mentioned this price drop before — but it’s worth repeating since linezolid was so notoriously expensive for so long that many clinicians might not realize the price has changed. How about fidaxomicin, mentioned above in the C. diff guidelines? No such luck.
- The most important risk factors for cefepime neurotoxicity are older age and decreased renal function. Encephalopathy and delirium, sometimes associated with myoclonus, are the most common manifestations; seizures may rarely occur.
- An interferon gamma release assay (IGRA) is now the preferred test in most settings for latent TB. Tuberculin skin tests (TSTs) continue to be used for “budgetary reasons,” or in the settings where both an IGRA and a TST would be useful. Indications for both IGRA and TST would be a high-risk setting where either test being positive would prompt treatment (e.g., prior to receiving TNF-blockers in a patient from a TB-endemic region), or in a low risk setting where either being negative would mean deferring therapy. Pet peeve: It’s better to say IGRA (“ig-rah”) than either of the brand names. Thank you.
- Doxycycline may have anti-inflammatory activity. This property, independent of its antibacterial effect, is the reason some dermatologists choose very low doses for treatment of acne, and why they sometimes continue it for ulcerative or bullous disease even in the absence of infection. Note that this ancillary effect was not mentioned by Rebeca Plank in our antibiotic draft, even though she chose doxycycline first. Maybe I should get it on a technicality?
- Fluoroquinolones should be avoided for acute sinusitis, acute bronchitis, and uncomplicated urinary tract infections unless there are no other treatment options. The reason — “fluoroquinolone toxicity syndrome,” which consists of “disabling and potentially permanent serious side effects … that can involve the tendons, muscles, joints, nerves, and central nervous system.” This FDA action in 2016 has substantially changed clinical practice, as previously these drugs were used like water — in other words, excessively.
- Dogs have been used to diagnose both C. diff and urinary tract infections. The best part about these papers are the videos (here and here) that cover them! The pictures are cute too (see above).
Meanwhile, in other news, there’s this podcast — highly recommended and entertaining!
https://www.facebook.com/andyborowitz/posts/10156754879150681
And note, not a single mention of an antibiotic.
April 16th, 2018
Hepatitis C Positive Organ Donors — Coming Soon to a Transplant Center Near You
There’s one immutable fact in solid organ transplantation — the number of patients awaiting transplant exceeds the number of available organs.
This shortage means that ethical, medically safe strategies to increase the donor pool are always a high priority.
One such strategy would be to allow transplants from people who have chronic hepatitis C.
If the thought of transplanting an HCV-infected organ into an uninfected recipient gives you pause, you’re not alone — the practice is explicitly discouraged in some transplant guidelines.
However, HCV today is an entirely different beast than when these guidelines were crafted. Treatment is now astoundingly safe and effective, with over 95% of patients cured, typically with 8–12 weeks of simple therapy.
Not surprisingly, transplant programs are now studying the safety of conducting transplants from HCV-infected donors into HCV-uninfected recipients, then treating with HCV therapy.
While published data are still relatively sparse, two small studies in renal transplant recipients (here and here, 10 patients each), showed that HCV treatment at the time of transplant or shortly after is safe and effective. None of the 20 patients developed chronic hepatitis C.
Now a third study (led by my colleague Ann Woolley), has just been presented at the annual meeting of the International Society for Heart and Lung Transplantation.
In this trial of lung and heart transplant recipients, 33 patients received organs from donors who were HCV viral load positive; an additional 8 came from donors who were HCV antibody positive but viral load negative. The former group received an abbreviated 4-week course of sofosbuvir-velpatasvir right after transplant; the latter only received treatment if they became viremic (none has to date).
With the caveat that the study is ongoing, thus far the the regimen has been well-tolerated, with no one developing chronic HCV.
Not surprisingly, several other hepatitis C donor protocols are starting, but it’s not rocket science to predict their outcomes. HCV can be effectively treated and cured (or prevented, if you interpret preemptive therapy that way) in transplant recipients, with currently available regimens.
Doing so will greatly increase the pool of available organs. In a tragic silver lining to the horrible opiate epidemic cloud over our country, premature deaths from overdoses may provide life-saving organs to patients in desperate need — organs that previously would have been discarded due to hepatitis C. A paper published today shows that the number of donated organs from overdose deaths has already increased 24-fold since the year 2000 — imagine what this increase would be if organs from people with HCV were permitted.
(Sorry about the silver lining cliché there — but at least I’m in good company!)
Are there remaining research questions with this strategy? Of course — among these include selection of the best regimen, the duration of therapy, management of drug interactions, and cost. Plus, we must recognize that these remain high risk donors who may have other infectious diseases (besides HCV) that will influence transplant outcomes.
But these are answerable questions, with none insurmountable. As noted in this excellent editorial, we’ve long allowed transplants from CMV-positive to CMV-negative patients — and the antiviral regimens for CMV are far less safe and effective than those for HCV.
Can’t you see a policy change coming soon?
April 8th, 2018
Latest DHHS Guidelines for Initial HIV Therapy Now Include 5 Choices — But Really 2 Are Best
On March 28, the Department of Health and Human Services Guidelines issued an update to the HIV treatment guidelines, with a focus on the recent approval of bictegravir/TAF/FTC:
BIC/TAF/FTC is an effective and well-tolerated INSTI-based regimen for initial therapy in adults with HIV, with efficacy that is noninferior to DTG/ABC/3TC and DTG plus TAF/FTC for up to 48 weeks. On the basis of these clinical trial results, the Panel classifies BIC/TAF/FTC as one of the Recommended Initial Regimens for Most Adults with HIV.
Based on this change, there are now five recommended initial regimens for most people:
- Bictegravir/TAF/FTC
- Dolutegravir/ABC/3TC
- Dolutegravir + TAF (or TDF)/FTC
- Elvitegravir/cobicistat/TAF (or TDF)/FTC
- Raltegravir + TAF (or TDF)/FTC
All are based on an integrase inhibitor and a pair of NRTIs. Four have tenofovir/FTC as the NRTI pair. Three are available as a single tablet, once daily.
But with the important caveat that what follows represents my opinion and not that of these or any other guidelines, one could easily argue that there are really two primary choices here, not five.
And those are dolutegravir + TAF (not TDF)/FTC and, now, bictegravir/TAF/FTC.
Here’s why:
- Raltegravir and elvitegravir both have a lower resistance barrier than dolutegravir and bictegravir. Virologic failure with elvitegravir and raltegravir may select for integrase resistance, usually along with NRTI resistance. This hasn’t happened yet in any clinical trial of dolutegravir or bictegravir for initial therapy, at least when given with two NRTIs.
- Elvitegravir requires the pharmacokinetic booster cobicistat. This greatly increases the drug interactions of this option, some of which are highly clinically significant.
- Raltegravir is two pills. In addition, it cannot be coformulated.
- The association between abacavir and cardiovascular disease has become stronger with recent research. In addition, abacavir requires pre-treatment HLA-B5701 testing and does not treat hepatitis B. Furthermore, the coformulation of dolutegravir/ABC/3TC is the largest of the single-pill options for HIV therapy.
- TAF has a better renal and bone safety profile than TDF. There will likely be cost benefits of TDF/FTC over TAF/FTC eventually, but they are not yet realized in the clinic.
As of April 8, 2018 (the day I’m writing this post), the choice between the two remaining options reflects how we and our patients feel about two issues.
If giving one pill rather than two is most important, then go with bictegravir/TAF/FTC.
If accumulated safety and “real world” experience is most important, then go with dolutegravir plus TAF/FTC.
Hey, isn’t HIV treatment simple these days?
April 1st, 2018
News Flash — The World Isn’t Sterile
You might have missed this press release from the National Institute of Allergy and Infectious Diseases (NIAID):
Bethesda, MD
April 1, 2018
The National Institute of Allergy and Infectious Diseases, at the National Institutes of Health, invites grant applications which propose research in the following 3 critical world health challenges:
1. Development of an effective HIV vaccine.
2. Global eradication of malaria.
3. Identification of the germs you can find lurking on or inside everyday objects. Priority items for this research include the kitchen drying rack, the shower curtain, and bathtub toys.
Well, not really.
But the inspiration for that (lame) April Fools’ Day joke was this recently published study finding bacteria inside your kid’s rubber duck.
And it’s not just rubber ducks. A prior study found these and other scary bugs in your office coffee maker.
While we’re at it, let’s take a look at your flight’s tray table.
On your kitchen sponge.
Or in the other room, on your TV remote control.
Outside, in the playground sandbox.
And beware your doctor’s necktie and stethoscope. And that white coat? Teeming. I could go on and on.
(In fact, I already did!)
Indeed, if you look hard enough, bacteria can be found literally everywhere — except perhaps inside your hospital’s autoclave.
What’s missing from all these studies, of course, is a correlation between identification of these bugs and any subsequent diseases. It’s not as if kids with rubber ducks are coming down with more infections than kids who don’t have them.
Perhaps a competing bath toy company will fund a clinical outcomes study, but don’t hold your breath. The rubber ducks have quite a stranglehold on this market.
In summary, bacteria on common household, work, and travel items are ubiquitous; furthermore, we lack any clinical data that this is important in any way.
Hence, I wonder — why are these “we found bacteria on [common-item]” studies so common? Even more perplexing, why are they such popular news fodder? The press can’t seem to get enough.
According to its Altmetric score (pictured to the right), the above-mentioned rubber duck study is a bigger news story than the fact that rates of tuberculosis in the USA have reached historic lows.
(Since TB control is one of the few things our crazy U.S. healthcare system does really well, I like to publicize these data whenever possible. You’re welcome.)
And what do we call these studies? Clearly the very category deserves a name:
I need a clever word or phrase to describe this category of study: "We cultured [common household/work/travel item]; here are the [scary sounding microbes] we found."
Suggestions? https://t.co/jSPg8LTi5n— Paul Sax (@PaulSaxMD) April 1, 2018
While there are several excellent proposals, I’m particularly partial to two answers so far — “Quotidiome” and “Ubiquibiota” — and certainly understand the appeal of “Nocarediosis,” though that one might be a bit too obscure for non-ID types.
Any other ideas?
March 25th, 2018
Why Is Some Academic Spam Funnier Than Others?
This invitation made me laugh out loud:
From: International Journal of Poultry and Fisheries Sciences <poultry@symbiosisonline.us>
Date: Friday, March 23, 2018 at 7:03 AM
To: “Sax, Paul Edward,M.D.”
Subject: Accepting Articles for our Inaugural Issue: IJPFSDear Dr. Paul E Sax,
Greetings from International Journal of Poultry and Fisheries Sciences!
We are privileged to introduce International Journal of Poultry and Fisheries Sciences a peer reviewed journal and currently inviting papers for inaugural issue.
We had a glance at your published article “Tenofovir alafenamide versus tenofovir disoproxil fumarate, coformulated with elvitegravir, cobicistat, and emtricitabine, for initial treatment of HIV-1 infection: two randomised, double-blind, phase 3, non-inferiority trials.”.
We found your article very innovative, insightful & interesting; we really value your outstanding Contribution towards Scientific Community and it was really appreciated.
With the theme of ‘Serving Scientific Community for a better Mankind’, to International Journal of Poultry and Fisheries Sciences is publishing articles dealing with all aspects of poultry and fisheries. Being impressed by your quality work, we are contacting you to know if you can associate with us by submitting your upcoming research.
We accept any article (Research Paper, Review Articles, Short Communications, Case Reports, Mini- Review, Opinions, and Letter to Editors etc.) for publication so, we Request you, to provide your manuscript on or before March 29th, 2018.
Note: If need arises, we will extend the date of submission as per your convenience.
Your diligent work and speedy submission will expedite the release of the inaugural issue of the journal.
International Journal of Poultry and Fisheries Sciences would be highly appreciative of your contribution and cooperation.
Thank you for your valuable time! Kindly revert to us for your queries.Best Regards,
Carolyn Sonia
International Journal of Poultry and Fisheries Sciences
Symbiosis Group
This might be the most absurd single item of academic spam I’ve ever received.
Beats the invite from the Johnson Journal of Aquaculture and Research by a mile.
And surpassed everything on this list from Marty Hirsch, which I can’t resist sharing again:
Per Journal of Infectious Diseases Editor-in-Chief Marty Hirsch, a short list of copycat predatory journals over the years — with my personal, all-inclusive favorite highlighted! #academicspam pic.twitter.com/4Xy7VEpDnw
— Paul Sax (@PaulSaxMD) December 31, 2017
So congratulations to the “International Journal of Poultry and Fisheries Sciences,” or the “IJPFS,” as it’s commonly known to all — you are the winner!
Which got me wondering — why is some academic spam funnier than others?
March 18th, 2018
Why with Extremely Resistant Infections, It’s Extremely Important to Consult ID
Since the only procedures most of us Infectious Diseases doctors do with any regularity are biopsies of patient medical records, we have to justify our existence in other ways — such as collecting data on how our expertise improves patient outcomes.
There are a bunch of these papers published, with this one being the most widely cited (the title says it all):
Infectious Diseases Specialty Intervention Is Associated With Decreased Mortality and Lower Healthcare Costs
Here are a few more, hardly a comprehensive list:
- Staph aureus bacteremia (one of several) — some hospitals mandate ID consultation for this entity
- Infections related to solid organ transplantation
- Cryptococcal infection — as I’ve written before, who would try managing this tricky condition without ID input?
- Endocarditis
- Candidemia
Now, a paper just published in Open Forum Infectious Diseases looks at the effect of ID consultation on outcomes in patients hospitalized with multidrug-resistant organisms (MDROs).
The retrospective review spanned nearly 10 years of data and included over 4000 patients. The researchers found that ID consultation was associated with a significant reduction in all-cause mortality for drug-resistant S. aureus, Enterobacteriaceae, and polymicrobial MDRO infections.
For some of these infections, the effect was huge — a 50% decrease in deaths. Patients with resistant gram-negative infections also had a reduction in 30-day readmissions.
Studies like this are critically important to our specialty. They demonstrate the value of Infectious Diseases in ways that go far beyond simply counting “relative value units” (RVUs), a scoring system where we invariably come up short.
Finally, leave it to that bastion of common sense, Consumer Reports, to summarize the results perfectly:
Aside from the hyphen between “infectious-disease” in the subtitle, I couldn’t have said it better myself!
March 11th, 2018
Really Rapid Review — CROI 2018, Boston
The 25th Conference on Retroviruses and Opportunistic Infections (CROI) just wrapped up in warm, sunny Boston.
Everyone in attendance took advantage of the fine March weather to get some much-needed sun, to feel the sand between their toes, to sip a tropical drink, and to hear the latest in HIV research.
Well, the last part was true — CROI clearly remains our best meeting, the only one that brings together so much high quality research from so many disciplines. Clinical, basic, and behavioral researchers all have a place here.
And though the meeting was bookended by a pair of Nor’easters — the one at the start was a whopper, I thought my dog Louie would blow away in the wind — the weather during most of the conference was actually not bad at all.
On to some highlights, a Really Rapid Review®, with apologies ahead of time for the poor organization. As always, feel free to write in the comments section any important studies I might have missed.
- One-month of daily rifapentine/INH prevented TB as well as 9 months of daily INH [37LB]. First place in this RRR® goes to a TB prevention study — this is also a conference on opportunistic infections, remember? This important randomized clinical trial has the potential to change clinical practice, as clearly a one-month preventive strategy is far easier than a 9-month one. One big question — can we extrapolate to HIV negative people?
- 5 of 11 monkeys treated with both a TLR7 agonist plus a broadly neutralizing antibody did not rebound after stopping ART [73LB]. Not only that, cells from these monkeys (lymph node and PBMCs) did not transmit SHIV to other monkeys in an “adoptive transfer” demonstration of cure (or the closest thing we have to a proof of cure). Very exciting results, with the caveats being that these monkeys were treated with ART within 1-2 weeks of acquiring SHIV, this is SHIV (not HIV), and these are monkeys (not humans).
- No increase in IRIS when raltegravir added to a standard regimen of TDF/FTC/EFV [23]. Data are from the REALITY randomized trial in advanced HIV disease conducted in Africa, and contrast with information from observational studies.
- Twice daily dolutegravir plus two NRTIs is comparable to TDF/FTC EFV in TB/HIV coinfection [33]. The culprit in drug interactions for all these TB studies is rifampin, which voraciously eats many other drugs alive (that is, induces their metabolism). But doubling the dose of dolutegravir here seemed to do the trick. Note again — no increased risk of IRIS with DTG vs EFV, despite the faster virologic suppression.
- TAF/FTC [28LB] likely can be safely administered with rifampin, but bictegravir can’t [34]. More on this theme — in the first study, while rifampin lowered plasma levels, intracellular concentrations of tenofovir diphosphate were higher than with standard dose TDF. Doubling the dose of bictegravir did not overcome the induction of the drug’s metabolism.
- Darunavir/ritonavir plus 3TC is non-inferior to darunavir/ritonavir plus TDF/FTC [489]. Further follow-up of the ANDES study, done in Argentina — think GARDEL, only with DRV/r. Only one patient developed resistance (M184V in triple-therapy arm), and there was no difference in response between high- and low- viral load strata. Study sample size is relatively small (n=145) due to funding limitations.
- For patients starting therapy with HIV RNA > 100,000 and/or CD4 < 200, INSTI- and EFV-based regimens have the lowest risk of treatment failure[493]. Since the risk of dolutegravir resistance in treatment-naive patients is so low, DTG plus TAF/FTC has been our go-to regimen in these difficult to treat patients, who are underrepresented in clinical trials.
- Switching to BIC/FTC/TAF was non-inferior to continued DTG/ABC/3TC [22]. Remarkably few differences after the switch — same renal, bone, lipid outcomes. In clinical practice, this change will lead to a smaller tablet size and avoid ABC-related cardiovascular risk concerns, but otherwise won’t change much. Speaking of …
- A series of studies provided further evidence for the association between abacavir use and cardiovascular risk. On the 10-year anniversary of the first report of this association, a bunch of studies might put an end to this “controversy” — these included mechanistic studies involving platelet reactivity [80, 673], platelets and leukocytes [674], an association with pre-clinical CAD on CT angiography [670], and the predicted clinical impact of stopping abacavir on cardiovascular risk [692]. NA-ACCORD study on this issue also just published.
- Optimal management of 3rd-line ART in resource limited settings includes the use of darunavir/r and raltegravir, sometimes etravirine [30LB]. We can add this study to the numerous others that show that in treatment failure studies, the patients with the least resistance do the worst — it’s a marker for poor adherence. It will be important to document how treatment failures evolve with the widespread implementation of DTG/TDF/FTC, a regimen with a much higher resistance barrier than those with NNRTIs.
- Patients with primary HIV infection in France had remarkably high levels of transmitted integrase resistance [529]. 7.4%, 5.6%, and 5.3% in 2014, 2015, 2016, respectively. I wonder what fraction are clinically relevant mutations vs. polymorphisms. On this same topic …
- One patient in the treatment-naive studies of BIC/FTC/TAF had transmitted resistance to dolutegravir [532]. I believe this is the first time such high-level integrase resistance has been found in a treatment-naive patient. Since baseline integrase genotyping was not required for study entry, it was picked up retrospectively. The patient was randomized to BIC/FTC/TAF, and achieved virologic suppression.
- Certain patients with a history of lamivudine resistance can maintain virologic suppression on a two-drug regimen of lamivudine plus a PI or integrase inhibitor [498]. These M184V patients did, however, have more virologic “blipping”, suggesting that HIV control was less robust than with triple therapy. It’s also an observational study, not a randomized trial, and I can’t imagine choosing to use a two-drug 3TC-containing regimen in someone who is known already to have resistance.
- Women switching to BIC/FTC/TAF tolerated the regimen well and maintained virologic suppression [500]. Most had been receiving EVG-containing regimens previously. Since the licensing studies of this regimen had so few female participants, this trial of over 400 women is important if only to show that the treatment is effective in women too.
- San Francisco has been making remarkable progress in starting ART as soon as possible in newly diagnosed patients [93]. From 2013 to 2016, the median time from first care to initiating therapy decreased from 27 days to 1. Not surprisingly, the time to viral load < 200 also dramatically dropped, from 134 days to 61 days. A decrease in time to start ART was seen in all demographic groups, including traditionally vulnerable populations (racial and ethnic minorities, homeless).
- In a randomized strategy study, same day ART initiation again proved better than standard of care in patient engagement, virologic suppression [94]. Study was conducted in Lesotho, and the novel aspect is that it was also done after home HIV testing. Paper also published in JAMA.
- Sertraline does not improve outcomes in cryptococcal meningitis [36]. This commonly used antidepressant has in vitro antifungal activity, but didn’t do anything here, prompting early discontinuation of the study for futility. It was certainly worth trying — we definitely need strategies to improve the outcomes with this challenging disease!
- Discontinuation of DTG due to CNS side effects is not associated with prior psychiatric diagnoses or plasma levels [424]. The discontinuation rate for DTG overall was 6%, and female sex and older age were risk factors. The lack of association with plasma levels differs from a previous study done in Japan.
- Patients surveyed about their preference for novel dosing strategies for ART chose “a single pill taken once a week” as preferred [503]. The other options were “two shots given in the clinic every other month” and “two small plastic implants in the forearm every 6 months.”
- Treatment of HIV controllers with TDF/FTC/RPV reduces T-cell activation and markers of immune exhaustion [229]. (Disclosure: co-investigator.) Plasma HIV RNA also further declined, and treatment was associated with a modest improvement in quality of life. No effect on absolute CD4 cell counts or HIV DNA.
- Only 11% of MSM with acute HCV clear the virus spontaneously [129]. If there is < 2 log drop in HCV RNA by week 4, then clearance is extremely unlikely. The data suggest treatment should be offered at that earlier time point (week 4), for the benefit of both the patient and to prevent further ongoing transmission.
- In coinfected patients, FTC/TAF (as part of the BIC/FTC/TAF regimen) shows good activity vs hepatitis B [618]. In this secondary analysis of prospective clinical trials, one patient randomized to a non-TAF regimen acquired hepatitis B.
- New HIV infections in Australia have dropped dramatically in association with widespread use of PrEP [88]. The bulk of their HIV epidemic is in MSM, making the target for HIV prevention clear. Plus, one Australian clinician told me that around 95% of those in care are virologically suppressed, which beats the typical US-clinic suppression rate of 85% or so.
- Very low doses of MK-8591 protect rhesus macaques against SHIV infection [89LB]. Results suggest this drug might be suitable for less frequent dosing as a PrEP strategy.
- Crystal methamphetamine is bad for your telomeres [760]. In a cross sectional study comparing HIV infected people who do and do not use crystal meth, along with HIV negative controls, those who were HIV infected with meth use had telomere “T/S ratios” consistent with 20 years of accelerated aging. This rings true from clinical practice! What a terrible drug.
The dates of CROI are no longer a tightly kept secret (hooray!), so we already know that next year’s meeting will be in Seattle, March 4-7, 2019.
As for here in Boston, we’re getting ready for our next big storm.
So what did I miss?